Package: OTclust 1.0.6

OTclust: Mean Partition, Uncertainty Assessment, Cluster Validation and Visualization Selection for Cluster Analysis

Providing mean partition for ensemble clustering by optimal transport alignment(OTA), uncertainty measures for both partition-wise and cluster-wise assessment and multiple visualization functions to show uncertainty, for instance, membership heat map and plot of covering point set. A partition refers to an overall clustering result. Jia Li, Beomseok Seo, and Lin Lin (2019) <doi:10.1002/sam.11418>. Lixiang Zhang, Lin Lin, and Jia Li (2020) <doi:10.1093/bioinformatics/btaa165>.

Authors:Lixiang Zhang [aut, cre], Beomseok Seo [aut], Lin Lin [aut], Jia Li [aut]

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OTclust.pdf |OTclust.html✨
OTclust/json (API)
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14 exports 0.36 score 30 dependencies 6 scripts 276 downloads

Last updated 12 months agofrom:1730ee0f5e. Checks:OK: 9. Indexed: yes.

Exports:alignclustCPScplotCPSensemblejaccardmplototclustotplotperturbpplotpreprocessvisCPSwassDist

Dependencies:classclicolorspacefansifarverggplot2gluegtableisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmepillarpkgconfigR6RColorBrewerRcpprlangscalestibbleutf8vctrsviridisLitewithr